Category: Research

Erika Hersch-Green Receives NSF CAREER Award

Erika Hersch-Green, plant evolutionary ecologist and associate professor of Biological Sciences, received a National Science Foundation CAREER Award. She will investigate how specific attributes of plants, such as their genome size, influence community biodiversity responses to increased nitrogen and phosphorus availability. Hersch-Green’s approach combines molecular, cytological, physiological, and phylogenetic techniques.  

Erika Hersch-Green
Erika Hersh-Green

Hersch-Green is conducting her research on three fronts. First, she is currently gathering fresh data and merging it with information from experimental grassland sites around the world. These sites have plots with different nutrient treatments, allowing her to examine how response patterns vary depending on climate conditions. Second, she is conducting controlled greenhouse studies to better understand mechanisms that focus on two common grassland plants: fireweed and goldenrod, both of which she has studied before. Lastly, she developed a new research site at Churning Rapids, north of Hancock and south of McClain State Park. There she is extending her research to look at how disturbance patterns affect levels of biodiversity. 

She is also exploring ways to improve students’ scientific literacy and engagement in research.  To accomplish this, she is incorporating students in grades 6 through 12 and undergraduates in research, enhancing research involvement in the classroom, facilitating effective scientific communication skills of graduate students, and promoting collaboration among undergraduate students and faculty in the Departments of Biological Sciences and Humanities. These students will produce video content that will be used to enhance education and public understanding of biological science and ecology.

To summarize, Hersch-Green aims to provide a system-level understanding of how nutrient eutrophication—the increasingly dense growth of particular plants at the expense of other species—and landscape disturbances affect individual organisms and multi-species communities by looking at their interactions.

Although she is passionate about her research, Hersch-Green is also deeply committed to the educational component of her CAREER award. Her educational goals are to increase both scientific literacy and engagement of high school and university students on critical topics related to nutrient eutrophication, biodiversity, evolutionary adaptation, and awareness of related STEM (science, technology, engineering, and math) career pathways. 

This blog post initially appeared in the Fall 2022 Biological Sciences Newsletter. Read this article and others like it today.

Paul Goetsch Receives NIH Grant to Study Cell Cycle Regulation

Dr. Goetsch assisting a graduate student in the lab

Assistant Professor Paul Goetsch received a $423,381 grant from the National Institutes of Health. Dr. Goetsch will study how the DREAM transcriptional repressor complex regulates the cell cycle of cellular progression and cellular quiescence.

Cellular division is extremely important as an organism grows to maturity, but just as important are the mechanisms that stop cells from dividing. Dysfunction in cellular quiescence generally leads to the development of cancer cells, Goetsch explains.

Working in the model system Caenorhabditis elegans, a 1 mm-long transparent nematode, the Goetsch lab is using CRISPR/Cas9-mediated genome editing to disrupt how the DREAM complex forms and test how that affects its function. “By exploiting advances in genomic editing and genetic tools in a tractable model system, we will gain new insights into how the DREAM complex protects cellular and organismal health,” says Goetsch.

Another part of the grant supports bringing research directly into the classroom for Biological Sciences students in the second-year genetics lab. Goetsch and his colleagues are implementing Course-based Undergraduate Research Experiences (CUREs). These are used to provide students a glimpse into research opportunities within the department.

In Spring 2021, Goetsch and his student Emily Washeleski developed a unique experiment combining C. elegans genetics with environmental microbiology. “We are continuing to expand upon our CURE approach to provide students equitable access to research experience as a cornerstone of their professional development within the department,” Goetsch says.

This blog post initially appeared in the Fall 2022 Biological Sciences Newsletter. Read this article and others like it today.

In the News

Ebenezer Tumban portriat
Ebenezer Tumban

Ebenezer Tumban (BioSci) was quoted in the story “MTU virologist discusses virus differences,” in the Daily Mining Gazette:

MTU virologist discusses virus differences

Joshua Vissers, Associate Editor, Daily Mining Gazette, March 27, 2020

HOUGHTON — Influenza and coronaviruses both travel between the infected wrapped in a stolen bit of the previous host cell’s outer, lipid-based layer called an envelope. That layer protects the viruses from harsh environments, and works as a kind of disguise to help them inject themselves into the next cell. The difference that makes an outbreak of coronavirus so much more dangerous is the difference in that envelope.

“Normally, envelope viruses are not stable in the environment,” Ebenezer Tumban said.

Tumban is a molecular virologist and vaccinologist at Michigan Technological University. He’s been studying viruses in an effort to learn how to vaccinate against them.

Envelopes dry out and deteriorate fairly quickly outside the body, and the virus inside is rendered helpless to infect another cell, he said.

This image shows the lipid envelope of coronavirus, taken from an infected cell, and the crown-like proteins added by the virus that are its namesake.
Provided image This image shows the lipid envelope of coronavirus, taken from an infected cell, and the crown-like proteins added by the virus that are its namesake.

However, coronaviruses have hollow proteins embedded in their envelope. Scientists thought this structure looked like a crown, and so called it corona (Latin for crown).

“The crown basically makes them more stable compared to the regular flu,” Tumban said.

This extra stability allows it to last longer in the air and on surfaces compared to influenza viruses. So a coronavirus-infected person coughing in an area can infect people passing though that area for much longer than someone with influenza.

Despite having symptoms quite similar to a flu, fighting a coronavirus is more difficult for the body than fighting a flu virus for a few reasons. 

“There’s a lot of things, some of it has to do with the virus and some of it has to do with us,” Tumban said.

A more stable envelope means the virus can exist in more parts of the human body. The flu virus is typically destroyed by fluid in the gastrointestinal tract, but COVID-19’s corona protects them from that, according to Tumban.

The virus also seems to be able to suppress immune system response in some people.

“People that were infected with coronavirus had a low level of lymphocytes,” he said.

This suggests that the coronavirus is also infecting those types of cells, which are part of the body’s defense system. The influenza virus doesn’t do that. 

Tumban said there’s also evidence that the virus can trigger a reaction in the body similar to an allergic reaction.

“My body might overreact and produce a lot of cytokines,” he said.

These cytokines can trigger sepsis and organ failure in severe cases.

And medical professionals have fewer tools to fight coronavirus, too.

“We don’t have a vaccine for corona, we have a vaccine for influenza,” Tumban said.

Influenza vaccines have been in use for a long time, training our immune systems in how to make antibodies that fight that particular virus and creating a group immunity that protects even those without the vaccine. While the flu virus does mutate regularly, it’s rarely enough to render a vaccine entirely ineffective.

“Vaccinations from the past might help to make the disease less severe compared to coronavirus which is new,” Tumban said. “You don’t have a single antibody against it in your body.”

People hospitalized with the flu can receive certain treatments like Tamiflu, but Tumban said with coronavirus, doctors right now mostly give “supportive care” – using tools like ventilators to support the patient’s body while it fights or endures the infection on its own.

These factors together create a much more deadly virus than the flu.

“The mortality rate is about 10 times that of influenza,” Tumban said on Tuesday.

Tumban’s calculations, based on numbers from the Centers for Disease Control, show that a high estimate of influenza’s mortality this year is about 0.1% in the United States, but coronavirus is showing to be about 1.27%. 

Worldwide, the mortality rate for coronavirus is about 4.3% according to Tumban.

The increased mortality and lack of treatment and defense are what is leading countries and organizations around the world to implement social distancing and quarantine measures as healthcare providers ramp up capacity and researches search for vaccines.

However, while coronavirus can be far more infectious and harmful than the influenza virus, many of the same precautions work to prevent infection. The No. 1 recommendation, hand washing and sanitizing, destroys the all-important envelope protecting the virus, rendering it virtually harmless.

“There’s no way they can cause the disease,” Tumban said.

Editor’s Note: This story has been changed to more accurately portray Dr. Tumban’s work. While he has worked directly with Zika, dengue, HPV and other viruses, he has not worked directly with coronaviruses.

New Funding

Bruce Lee (BioMed) is the principal investigator on a project that has received a $434,993 research and development grant from the National Institutes of Health.

The project is entitled, “Multifunctional Nanocomposite Bioadhesive for Diabetic Wound Repair.” Xiaoqing Tang (BioSci) and Rupak Rajachar (BioMed) are Co-PI’s on this potential three-year project.

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Ebenezer Tumban (BioSci) is the principal investigator on a project that has received a $435,591 research and development grant from the National Institutes of Health. The project is entitled, “Development of a Novel and Broadly Applicable Thermostable Bacteriophage VLPs Platforms for Vaccine Design, Drug Delivery, and Imaging.”

This is a potential three-year project.

Be Brief: Glow

Changes in pH cause the rhodol dyes to glow differently, offering insight into diseases that affect mitophagy.Fluorescent dyes help scientists see the inner workings of disease. In a new paper by Haiying Liu (Chem), Rudy Luck (Chem) and Thomas Werner (Bio Sci)—along with student researchers—they examine the efficacy of a rhodol-based fluorescent dye.

Diseases like Alzheimer’s and certain kinds of cancers affect the powerhouses of cells — mitochondria. To keep these powerhouses working efficiently, cells remove damaged mitochondria. This process, called mitophagy, is like a cell taking out the trash. In diseased cells, the garbage piles up and the cell’s pH changes. The rhodol dye responds to pH changes and glows brighter.

Luck adds that he considers it a privilege to be able to contribute to Liu’s attempts to find commercially viable probes. The team also acknowledges that the High-Performance Computer system Superior, managed under Director Gowtham, has advanced the research considerably.

Read more about the next steps of this research on the campus research blog Unscripted and celebrate National Chemistry Week with other Unscripted reads about surface chemistry, the science of brewing and mass spectrometry.

In Print

Business woman working on laptop computer at ergonomic standing desk. Female professional working at her desk with male colleague working at the back.John Durocher (BioSci)Steve Elmer (KIP) PhD student Ian Greenlund, recent graduate Piersan Suriano and Jason Carter published The paper titled “Chronic Standing Desk Use and Arterial Stiffness” in this month’s issue of the Journal of Physical Activity and Health.

The results of the study indicate that using a standing desk for more than 50% of the workday did not effectively reduce arterial stiffness. The study confirms that aerobic fitness reduces arterial stiffness, and that aging increases arterial stiffness. The authors wish to thank faculty and staff members from around campus who participated in this study.

The article can be viewed free.

Call for Applications: Songer Research Award for Human Health Research

2018-19 Songer Award Recipients.
2018-19 Songer Award Recipients. Pictured Left to Right: Abby Sutherland, Billiane Kenyon, Jeremy Bigalke, Rupsa Basu, Matthew Songer, and Laura Songer.

Matthew Songer, (Biological Sciences ’79) and Laura Songer (Biological Sciences ’80) have generously donated funds to the College of Sciences and Arts (CSA) to support a research project competition for undergraduate and graduate students. Remembering their own eagerness to engage in research during their undergraduate years, the Songers established these awards to stimulate and encourage opportunities for original research by current Michigan Tech students. The College is extremely grateful for the Songers’ continuing interest in, and support of, Michigan Tech’s programs in human health and medicine. This is the second year of the competition.

Students may propose an innovative medically-oriented research project in any area of human health. The best projects will demonstrate the potential to have broad impact on improving human life. This research will be pursued in consultation with faculty members within the College of Sciences and Arts. In the Spring of 2019, the Songer’s gift will support one award for undergraduate research ($4,000) and a second award for graduate research ($6,000). Matching funds from the College may allow two additional awards.

Any Michigan Tech student interested in exploring a medically related question under the guidance of faculty in the College of Sciences and Arts may apply. Students majoring in any degree program in the college, including both traditional (i.e., biological sciences, kinesiology, chemistry) and nontraditional (i.e., physics, psychology, social science, bioethics, computer science, mathematics) programs related to human health may propose research projects connected to human health. Students are encouraged to propose original, stand-alone projects with expected durations of 6 – 12 months. The committee also encourages applications from CSA students who seek to continue research projects initiated through other campus mechanisms, such as the Summer Undergraduate Research Fellowship (SURF) program, Pavlis Honors College activities or the Graduate Research Forum (GRF).

Funds from a Songer Award may be used to purchase or acquire research materials and equipment needed to perform the proposed research project. Access to and research time utilizing University core research facilities, including computing, may be supported. Requests to acquire a personal computer will be scrutinized and must be fully justified. Page charges for publications also may be covered with award funds, as will travel to appropriate academic meetings. This award may not be used for salary or compensation for the student or consulting faculty.

To apply:

  • Students should prepare a research project statement (up to five pages in length) that describes the background, methods to be used, and research objectives. The statement also should provide a detailed description of the experiments planned and expected outcomes. Students must indicate where they will carry out their project and attach a separate list of references/citations to relevant scientific literature.
  • The application package also should provide a concise title and brief summary (1 page) written for lay audiences.
  • A separate budget page should indicate how funds will be used.
  • A short letter from a consulting faculty member must verify that the student defined an original project and was the primary author of the proposal. The faculty member should also confirm her/his willingness to oversee the project. This faculty letter is not intended to serve as a recommendation on behalf of the student’s project.

Submit applications as a single PDF file to the Office of the College of Sciences and Arts by 4:00 p.m. Monday, April 22. Applications may be emailed to djhemmer@mtu.edu.

The selection committee will consist of Matthew Songer, Laura Songer, Shekhar Joshi (BioSci) and Megan Frost (KIP). The committee will review undergraduate and graduate proposals separately and will seek additional comments about the proposed research on an ad-hoc basis from reviewers familiar with the topic of the research proposal. Primary review criteria will be the originality and potential impact of the proposed study, as well as its feasibility and appropriateness for Michigan Tech’s facilities.

The committee expects to announce the recipients by early May of 2019. This one-time research award will be administered by the faculty advisor of the successful student investigator. Students will be expected to secure any necessary IRB approval before funds will be released. Funds must be expended by the end of spring semester 2020; extensions will not be granted. Recipients must submit a detailed report to the selection committee, including a description of results and an accounting of finds utilized, no later than June 30, 2020.

Any questions may be directed to Megan Frost (mcfrost@mtu.edu), David Hemmer (djhemmer@mtu.edu) or Shekhar Joshi (cpjoshi@mtu.edu).