Category: DataS

Grad Students Take 6th Place in Navy’s AI Tracks at Sea Challenge

by Karen S. Johnson, Communications Director, College of Computing


The Challenge

Four Michigan Tech graduate students recently took 6th place in the U.S. Navy’s Artificial Intelligence (AI) Tracks at Sea Challenge, receiving a $6,000 prize.

The Challenge solicited software solutions to automatically generate georeferenced tracks of maritime vessel traffic based on data recorded from a single electro-optical camera imaging the traffic from a moving platform.

Each Challenge team was presented with a dataset of recorded camera imagery of vessel traffic, along with the recorded GPS track of a vessel of interest that is seen in the imagery.

Graduate students involved in the challenge were Zach DeKraker and Nicholas Hamilton, both Computer Science majors advised by Tim Havens; Evan Lucas, Electrical Engineering, advised by Zhaohui Wang; and Steven Whitaker, Electrical Engineering.

Submitted solutions were evaluated against additional camera data not included in the competition testing set in order to verify generalization of the solutions. Judging was based on track accuracy (70%) and overall processing time (30%).

“We never got our final score, but we were the “first runner up” team,” says Lucas. “Based on our testing before sending it, we think it worked well most of the time and occasionally tracked a seagull or the wrong boat.”

The total $200,000 prize was distributed among five winning teams, which submitted full working solutions, and three runners-up, which submitted partial working solutions.

The Challenge was sponsored by the Naval Information Warfare Center (NIWC) Pacific and the Naval Science, Technology, Engineering, and Mathematics (STEM) Coordination Office, and managed by the Office of Naval Research. Its goal was to engage with the workforce of tomorrow on challenging and relevant naval problems, with the immediate need to augment unmanned surface vehicles’ (USVs’) maritime contact tracking capability.

The Problem

“The problem presented was to find a particular boat in a video taken of a harbor, and track its GPS coordinates.,” says Zach DeKraker. “We were provided with samples of other videos along with the target boat’s GPS coordinates for that video, which we were able to use to come up with a mapping from pixels to GPS coordinates.”

“Basically, we wanted to track boats with a video camera,” adds ECE graduate student Steven Whitaker. “Our team used machine learning and computer vision to do this. At weekly meetings we brainstormed approaches to tackling the problem, and at regular work sessions, together we programmed it all and produced a white paper with the technical details.”

Whitaker says the competition tied in pretty closely to work the students have already done. “We had a good majority of the code already written. We just needed to fit everything together and add in a few more details and specialize it for the AI Tracks at Sea research,” he explains.

Competitions like this one often connect directly or indirectly with a student’s academic and career goals.

“It’s good to not be pigeon-holed, and to use our knowledge in a different scenario,” Steven Whitaker says of these opportunities. “This helps us remember that there are other things in the world other than our small section of research.”

Dividing Responsibilities

The team knew that there were two primary issues at hand. First, how can the pixel coordinates be translated into GPS coordinates? And second, how can the boat be located so that GPS pixel coordinates can be determined?

“Once we broke it down into these two subproblems, it became pretty clear how to solve each half,” DeKraker says. “Steven had already done a significant amount of work mapping pixel coordinates into GPS coordinates, so we had a pretty quick answer to subproblem one.”

AI Tracks at Sea Flowchart

The team met weekly to discuss their ideas for the project and compare and contrast how effective they would be as solutions to the problem at hand. Then, they got together on Fridays or during the weekends to work together on the project.

“Dr. Havens would come in to our weekly meetings and nudge us in the right direction or give tips on what we should do and what we should avoid,” Whitaker adds.

For subproblem two, after some discussion the group decided it was probably best to use a machine learning approach, as that promised the most significant gains for the least amount of effort, which was important given the tight schedule.

“We tried some different sub-projects independently and then worked together to combine the parts we thought worked best,” Evan Lucas says.

The Solution

To identify the boat and track its movement, the team used a simple neural network and a computer vision technique called optical flow, which made the analysis much faster and cleaner. They used a pre-built algorithm, adding a bit of optical flow so that the boat’s position didn’t have to be verified every time.

AI Tracks at Sea Neural Net Summary

“These two tools allowed us to find the pixel coordinates of the boat and turn them into GPS coordinates,” DeKraker says, whose primary role in the project was integrating the two tools and packaging it for testing.

“Part of my PhD is to map out a snowmobile’s GPS coordinates with a camera,” Whitaker says. “This is extremely similar to mapping out a boat’s GPS coordinates. I could even say that it was exactly the same. I don’t believe I’ll add anything new, but I’ve tweaked it to work for my research.”

Whitaker sums up the team’s division of responsibilities like this: “Evan detects all the boats in the picture; Nik detects which of those boats is our boat; Steven takes our boat position and converts it to GPS coordinates, Zach glued all of our pieces together.”

DeKraker says, “One of the things the judges stressed was the ease of implementing the solution. Since that falls under what I would consider user experience (UX) or user interface (UI), it was pretty natural for me to take these tasks on, having studied software engineering for my undergrad,” DeKraker says.

A primary focus was speed. “Using machine learning for object detection tends to be slow, so to mitigate that we used the boat detector only once every 5 seconds,” DeKraker explains.

“Most of the tracking was done using a very fast technique called optical flow, which looks at the difference between two consecutive frames of a video to track motion,” DeKraker says. “It tended to drift from the target though, so we decided on running the boat detector every 5 seconds to keep optical flow on target. “

“The end result is that our solution could run nearly in real-time,” he says. “The accuracy wasn’t the best, but given a little bit more time and more training data, the neural network could be significantly improved.”

AI Tracks at Sea Homography Transform

Zach DeKraker

DeKraker’s graduate studies focus heavily on various machine learning techniques, He says that this opportunity to integrate machine learning into our solution was a fantastic experience.

“First, it sounded like an interesting challenge. I don’t get to do a lot of software design these days, and this challenge sounded like a great opportunity to do just that,” he explains.

“Second, it looked like a great opportunity to build up my resume a little bit. Saying that you won thousands of dollars for your university in a nationwide competition sounds really good. And finally, I really wanted the chance to see a practical application of machine learning in action.”

DeKraker completed a BS in Software Engineering at Michigan Tech in 2018. He returned to Michigan Tech the next year to complete his master’s degree. He says the biggest reason he did so was to learn more about machine learning.

“Before embarking on this journey, I really didn’t know anything about it,” he says of machine learning. “Having this chance to actually solve a problem, to integrate a neural network into a fully realized boat tracker using nothing but a video helped me see how machine learning can be used practically, rather than merely understanding how it works.”

And although it was a fascinating exploration into the practical side of machine learning and computer vision, DeKraker says it’s rather tangential to his main research focus right now, which is on comparing different network architectures to evaluate which one performs best given particular data and the problem being solved.

DeKraker believes that the culture is the most magnetizing thing about Tech. “Everybody here is cut from the same cloth. We’re all nerds and proud of it,” he explains. “You can have a half-hour conversation with a complete stranger about singularities, the economics of fielding a fleet of star destroyers, or how Sting was forged.”

And the most appealing thing about Michigan Tech was its size. DeKraker says. “When I looked at a ranking of the top universities in Michigan, Tech was number 3, but still extremely small. It was a perfect blend of being a small but very good school.”

And he says the second-best thing about Tech is the location. “The Keweenaw is one of the most beautiful places on earth.”

DeKraker has many ideas about where he’d like to take his career. For instance, he’d love the chance to work for DARPA, Los Alamos National Laboratory, or NASIC. He also intends to commission into the Air Force in the next couple of years, “if they have a place for programmers like me.”

Evan Lucas

Evan Lucas is a PhD candidate in the Electrical Engineering department., advised by Zhaohui Wang. Lucas completed both a bachelor’s and master’s in Mechanical Engineering at Tech in 2012 and 2014,

Lucas, whose research interests are in applying machine learning methods to underwater acoustic communication systems, worked on developing a classifier to separate the boat of interest from the many other boats in the image. Although the subject of the competition is tangential to Lucas’s graduate studies, as computer vision isn’t his area, there was some overlap in general machine learning concepts. respectively.

“It sounded like a fun challenge to put together an entry and learn more about computer vision,” Lucas says. “Working with the rest of the team was a really good opportunity to learn from people who have experience making software that is used by other people.”

Following completion of his doctoral degree, hopefully in spring 2023, Lucas plans to return to industry in a research focused role that applies some of the work he did in his PhD.


Steven Whitaker

Steven Whitaker’s research interests are in machine learning and acoustics. He tracks and locates the position of on-ice vehicles, like snowmobiles, based on acoustics. He says he has used some of the results from this competition project in his PhD research.

Whitaker’s machine learning research is experiment-based., and that’s why he chose Michigan Tech. “There aren’t many opportunities in academia to do experiment-based research,” he says. “Most machine learning is very software-focused using pre-made datasets. I love doing the experiments myself. Research is fun. I enjoy getting paid to do what I normally would do in my free time.”

In 2019, Whitaker completed his BS in Electrical Engineering at Michigan Tech. He expects to complete his master’s degree in Electrical Engineering at the end of the summer 2021 semester, and his PhD in summer 2022. His advisors are Tim Havens and Andrew Barnard.

Whitaker would love to be a university professor one day, but first he wants to work in industry.


Background Info

Timothy Havens is associate dean for research, College of Computing; the William and Gloria Jackson Associate Professor of Computer Systems; and director of the Institute of Computing and Cybersystems (ICC). His research interests are in pattern recognition and machine learning, signal and image processing, sensor and data fusion, heterogeneous data mining, and explosive hazard detection.

Michael Roggeman is a professor in the Electrical and Computer Engineering department. His research interests include optics, image reconstruction and processing, pattern recognition, and adaptive and atmospheric optics.

Zhaohui Wang is an associate professor in the Electrical and Computer Engineering department. Her research interests are in communications, signal processing, communication networks, and network security, with an emphasis on underwater acoustic applications.

The Naval Information Warfare Center (NIWC) Pacific and the Naval Science, Technology, Engineering, and Mathematics (STEM) Coordination Office, managed by the Office of Naval Research are conducting the Artificial Intelligence (AI) Tracks at Sea challenge.

View more details about the Challenge competition here: https://www.challenge.gov/challenge/AI-tracks-at-sea/

Watch a Navy webinar about the Challenge here: https://www.youtube.com/watch?v=MjZwvCX4Tx0.

Challenge.gov is a web platform that assists federal agencies with inviting ideas and solutions directly from the public, or “crowd.” This is called crowdsourcing, and it’s a tenet of the Challenge.gov program. The website enables the U.S. government to engage citizen-solvers in prize competitions for top ideas and concepts as well as breakthrough software, scientific and technology solutions that help achieve their agency missions.

This site also provides a comprehensive toolkit, a robust repository of considerations, best practices, and case studies on running public-sector prize competitions as developed with insights from prize experts across government.

New Course: Applied Machine Learning


Summary

  • Course Number: 84859, EET 4996-01
  • Class Times: T/R, 9:30-10:45 am
  • Location: EERC 0723
  • Instructor: Dr. Sidike Paheding
  • Course Levels: Graduate, Undergraduate
  • Prerequisite: Python Programming and basic knowledge of statistics.
  • Preferred knowledge: Artificial Intelligence (CS 4811) or Data Mining (CS4821) or Intro to Data Sciences (UN 5550)

Course Description/Overview

Rapid growth and remarkable success of machine learning can be witnessed by tremendous advances in technology, contributing to the fields of healthcare, finance, agriculture, energy, education, transportation and more. This course will emphasize on intuition and real-world applications of Machine Learning (ML) rather than statistics behind it. Key concepts of some popular ML techniques, including deep learning, along with hands-on exercises will be provided to students. By the end of this course, students will be able to apply a variety of ML algorithms to practical

Instructor

Applications Covered

  • Object Detection
  • Digital Recognition
  • Face Recognition
  • Self-Driving Cars
  • Medical Image Segmentation
  • Covid-19 Prediction
  • Spam Email Detection
  • Spectral Signal Categorization

Tools Covered

  • Python
  • scikit learn
  • TensorFlow
  • Keras
  • Open CV
  • pandas
  • matplotlib
  • NumPy
  • seaborn
  • ANACONDA
  • jupyter
  • SPYDER

Download the course description flyer:

Weihua Zhou, CC, to Present Lecture April 8

by Mechanical Engineering-Engineering Mechanics

The net virtual graduate Seminar Speaker will be held at 4 p.m. tomorrow (April 8) via Zoom.

Weihua Zhou (CC) will present “Artificial intelligence for medical image analysis: our approaches. “

Zhou, is an assistant professor of applied computing at Michigan Tech. He has been doing research on medical imaging and informatics since 2008. Attend virtually.

View the University Events Calendar, which includes a registration link and additional information about Dr. Zhou and his research.

Get to Know Dr. Sangyoon Han, Biomedical Engineering


Dr. Sangyoon Han is an assistant professor in Michigan Tech’s Biomedical Engineering department, and an affiliated assistant professor in the Mechanical Engineering-Engineering Mechanics department. He is also advisor to the Korean Students Association. He has been with Michigan Tech since 2017.

Han recently joined the Institute of Computing and Cybersystems and its Data Sciences research group. His primary research interests are in mechanobiology, cell migration, and image data modeling. His research goals include applying computer vision to microscopic images to capture meaningful information, and he’s looking for collaborators.

“Anyone with a good machine learning background is encouraged to contact me to discuss potential research,” he says. “Also, students who learned assignment problems or particle tracking are encouraged to contact me to discuss potential tracking-related projects.”

Teaching and Mentoring

Han’s teaching interests include computer vision for microscopic images, fluid mechanics, cell biomechanics and mechanobiology, and soft tissue mechanics. This academic year, he instructed Computer Vision for Microscopic Images in the Fall semester, and Fluid Mechanics this Spring.

Han enjoys teaching and interacting with students, “and feel their energy, too.” He says he makes a deliberate effort in his classes to pause from time to time so that his students can ask questions.

Han advises two Biomedical Engineering Ph.D. students, Nikhil Mittal and Mohanish Chandurkar.

“Nik is working on finding myosin-independent mechanosensitivity mechanism for stiffness sensing, and Mohanish works on the project finding mechano-transmission for fluid shear stress sensing by endothelial cells,” he says.

Research Aspirations

Han’s Mechanobiology Lab is interested in finding fundamental mechanisms governing mechanotransduction, and how cells sense mechanical forces and convert them into biochemical signals.

“We image cells and associated forces using high-resolution live imaging, which we analyze to obtain statistically meaningful quantity of data,” Han explains. “We apply force-measuring and molecular-imaging/analysis technologies for stiffness sensing, shear flow sensing, adhesion assembly, and cancer mechanobiology.”

Han is working to gain a thorough understanding of the mechano-chemical interaction between cancer cells and their microenvironment, and develop a an effective mechano-therapeutic strategy to stop the progression of cancer, and breast cancer in particular. Ultimately, he wants to apply that knowledge to cancer mechanobiology

Han is principal investigator of a three-year NIH/NIGMS research project, “Nascent Adhesion-Based Mechano-transmission for Extracellular Matrix Stiffness Sensing.” The research aims to determine whether newly-born adhesions can sense tissue stiffness through the accurate measurement of the mechanical force and molecular recruitment of early adhesion proteins.

Some Background

In 2012, Han received his Ph.D. in Mechanical Engineering from the University of Washington in the areas of cell mechanics, multiphysics modeling, and bioMEMS.

For his postdoctoral training, he joined the Computational Cell Biology lab led by Dr. Gaudenz Danuser in the Cell Biology department of Harvard Medical School. In 2014, he joined the UT Southwestern (University of Texas) Department of Cell Biology and Bioinformatics. Han received his B.S and M.S. degrees in mechanical engineering at Seoul National University, Korea, in 2002 and 2004, respectively.

Han holds several patents and in 2015, he developed an open-source TFM (Traction Force Microscopy) Package, which is shared via his lab’s website: hanlab.biomed.mtu.edu/software.

Beyond Research and Teaching

Han loves science and discovering something new in his research investigations. Beyond his work as a professor and scientist, he describes himself as a husband to Sunny, and a dad to his son, Caleb.

“I am just a normal Korean who likes singing and dancing,” he says. “Unfortunately, my voice is still recovering from surgery, but I hope to get back to it soon. I also like to listen to all kinds of music, including hip-hop, classics, and pop.”

He appreciates a good sense of humor, but he says that being humorous in American English is something he continues to learn.

Han says he tries to be “normal” and not too nerd-like when he’s not pursuing his research, but “there are times when I am making my own hypothesis about some phenomena I observe in my daily life.”

Han enjoys life at Michigan Tech and in the Cooper Country. He likes getting to know his energetic students and he finds Michigan Tech faculty members very strong and collegial. He also enjoys the snow, hockey, and the mountains.

“I really like the snow here. I am already sad that the weather is becoming too mild!” he confirms. “It’s also a safe environment to raise kids, which is a big plus.”

And he likes his academic department. “Everyone is so nice in the Biomedical Engineering program, they have been so welcoming and appreciative my research,” Han says. “It’s a family-like environment.”


Active Research

1R15GM135806-01 (09/16/2019 – 08/31/2022)

Funding Agency: NIH/NIGMS

Nascent Adhesion-Based Mechano-transmission for Extracellular Matrix Stiffness Sensing

Project Goals: To determine whether newly-born adhesions can sense tissue stiffness by accurate measurement of mechanical force and of molecular recruitment of early adhesion proteins using traction force microscopy and computer vision techniques.
Role: Principal Investigator


Additional Information

The Mechanobiology Lab studies mechanobiology, particularly how adherent cells can sense and respond to mechanical stiffness of the extracellular matrix. To investigate this, the lab has established experimental and computational frameworks for force measurement and adhesion dynamics quantification. Researchers apply these frameworks, with cutting edge computer vision technique, on live-cell microscope images to investigate the fundamental mechanism underlying mechanosensation in normal cells, and the biomechanical signature of the diseased cells whose signaling has gone awry.

The Institute of Computing and Cybersystems (ICC) creates and supports an arena in which faculty and students work collaboratively across organizational boundaries in an environment that mirrors contemporary technological innovation. The ICC’s 60+ members, in six research centers, represent more than 20 academic disciplines at Michigan Tech. https://www.mtu.edu/icc/

The ICC Center for Data Sciences (DataS) focuses on the research of data sciences education, algorithms, mathematics, and applications. https://www.mtu.edu/icc/centers/data-sciences/

The National Institutes of Health (NIH), a part of the U.S. Department of Health and Human Services, is the nation’s medical research agency — making important discoveries that improve health and save lives. https://www.nih.gov/

The National Institute of General Medical Sciences (NIGMS) supports basic research that increases understanding of biological processes and lays the foundation for advances in disease diagnosis, treatment, and prevention. https://www.nigms.nih.gov/


Recent Publications

  • Han, S. J.; Azarova, E. V.; Whitewood, A. J.; Bachir, A.; Guttierrez, E.; Groisman, A.; Horwitz, A. R.; Goult, B. T.; Dean, K. M.; Danuser, G. Pre-Complexation of Talin and Vinculin without Tension Is Required for Efficient Nascent Adhesion Maturation. eLife 2021, 10, e66151. https://doi.org/10.7554/eLife.66151.
  • Schäfer, C., Ju, Y., Tak, Y., Han, S.J., Tan, E., Shay, J.W., Danuser, G., Holmqvist, M., Bubley, G. (2020) TRA-1-60-positive cells found in the peripheral blood of prostate cancer patients correlate with metastatic disease. Heliyon 6(1), e03263.
  • Isogai, T., Dean, K.M., Roudot, P., Shao, Q., Cillay, J.D., Welf, E.S., Driscoll, M.K., Royer, S.P., Mittal, N., Chang, B., Han, S.J., Fiolka, R., Danuser, G., Direct Arp2/3-vinculin binding is essential for cell spreading, but only on compliant substrates and in 3D, BioRxiv, 2019
  • Mohan, A.S., Dean, K.M., Isogai, T., Kasitinon, S.Y., Murali, V.S., Roudot, P., Groisman, A., Reed, D.K., Welf, E.S., Han, S.J., Noh, J., and Danuser, G. (2019). Enhanced Dendritic Actin Network Formation in Extended Lamellipodia Drives Proliferation in Growth-Challenged Rac1P29S Melanoma Cells. Developmental Cell, 49(3), pp.444-460.
  • Manifacier I., Milan, J., Beussman, K., Han, S.J., Sniadecki, N.J., About, I (2019) The consequence of large-scale rigidity on actin network tension. In press. Comp Meth Biomech Biomed Eng, 2019 Oct;22(13):1073-1082.
  • Costigliola, N., Ding, L., Burckhardt, C.J., Han, S.J., Gutierrez, E., Mota, A., Groisman, A., Mitchison, T.J., and Danuser, G. (2017) Vimentin directs traction stress. PNAS2017 114 (20) 5195-5200.
  • Han, S.J., Rodriguez M.L., Al-Rekabi, Z., Sniadecki, N.J. (2016) Spatial and Temporal Coordination of Traction Forces in One-Dimensional Cell Migration, Cell Adhesion & Migration. 10(5): 529-539.
  • Oudin, M.J., Barbier, L., Schäfer, C, Kosciuk, T., Miller, M.A., Han, S.J., Jonas, O., Lauffenburger, D.A., Gertler, F.B. (2016) Mena confers resistance to Paclitaxel in triple-negative breast cancer. Mol Cancer Ther.DOI: 10.1158/1535-7163. MCT-16-0413. 
  • Milan,J., Manifacier, I., Beussman, K.M., Han, S.J., Sniadecki, N.J., About, I., Chabrand, P. (2016) In silico CDM model sheds light on force transmission in cell from focal adhesions to nucleus. J Biomechanics. 49(13):2625-2634. 
  • Lomakin. A.J., Lee, K.C., Han, S.J., Bui, A., Davidson, M., Mogilner, A., Danuser G. (2015) Competition for molecular resources among two structurally distinct actin networks defines a bistable switch for cell polarization, Nature Cell Biology. 17, 1435–1445
  • Han, S.J., Oak, Y., Groisman, A., Danuser, G. (2015) Traction Microscopy to Identify Force Modulation in Sub-resolution Adhesions, Nature Methods. 12(7): 653–656

Call for Manuscripts: Fault Tolerance in Cloud/Edge/Fog Computing

Call for Manuscripts:

Special Issue on Fault Tolerance in Cloud/Edge/Fog Computing in Future Internet, an international peer-reviewed open access monthly journal published by MDPI.

Informational Flyer

https://blogs.mtu.edu/icc/files/2021/04/ali-ebnenasir-call-for-papers-032521-sm.pdf

Deadline

April 20, 2021

Author Notification

June 10, 2021

Website

mdpi.com/journal/futureinternet/special_issues/FT_CEFC

Collection Editors

Keywords

  • Fault tolerance
  • Cloud computing
  • Edge computing
  • Resource-constrained devices
  • Distributed protocols
  • State replication

Topics

Including, but not limited to:

  • Faults and failures in cloud and edge computing.
  • State replication on edge devices under the scarcity of resources.
  • Fault tolerance mechanism on the edge and in the cloud.
  • Models for the predication of service latency and costs in distributed fault-tolerant protocols on the edge and in the cloud.
  • Fault-tolerant distributed protocols for resource management of edge devices.
  • Fault-tolerant edge/cloud computing.
  • Fault-tolerant computing on low-end devices.
  • Load balancing (on the edge and in the cloud) in the presence of failures.
  • Fault-tolerant data intensive applications on the edge and the cloud.
  • Metrics and benchmarks for the evaluation of fault tolerance mechanisms in cloud/edge computing.

Background

The Internet of Things (IoT) has brought a new era of computing that permeates in almost every aspect of our lives. Low-end IoT devices (e.g., smart sensors) are almost everywhere, monitoring and controlling the private and public infrastructure (e.g., home appliances, urban transportation, water management system) of our modern life. Low-end IoT devices communicate enormous amount of data to the cloud computing centers through intermediate devices, a.k.a. edge devices, that benefit from stronger computational resources (e.g., memory, processing power).

To enhance the throughput and resiliency of such a three-tier architecture (i.e., low-end devices, edge devices and the cloud), it is desirable to perform some tasks (e.g., storing shared objects) on edge devices instead of delegating everything to the cloud. Moreover, any sort of failure in this three-tier architecture would undermine the quality of service and the reliability of services provided to the end users.

Scope

Theoretical and experimental methods that incorporate fault tolerance in cloud and edge computing, which have the potential to improve the overall robustness of services in three-tier architectures.

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website (https://www.mdpi.com/user/login/). Once you are registered, click here to go to the submission form (https://susy.mdpi.com/user/manuscripts/upload/?journal=futureinternet).

Manuscripts can be submitted until the deadline. All papers will be peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page.

Please visit the Instructions for Authors page before submitting a manuscript.

The Article Processing Charge (APC) for publication in this open access journal is 1400 CHF (Swiss Francs). Submitted papers should be well formatted and use good English.

Authors may use MDPI’s English editing service prior to publication or during author revisions.

Sangyoon Han Publishes Paper in eLife

eLife, a prestigious journal in cell biology, has published a paper co-written by Sangyoon Han, “Pre-complexation of talin and vinculin without tension is required for efficient nascent adhesion maturation.”

Dr. Han is an assistant professor in the Biomedical Engineering department, and a member of the Data Sciences research group of the Institute of Computing and Cybersystems (ICC).

View the paper here.

eLife is a non-profit organization created by funders and led by researchers. Their mission is to accelerate discovery by operating a platform for research communication that encourages and recognizes the most responsible behaviors.

Sidike Paheding, Applied Computing, Publishes Paper in IEEE Access

A paper co-authored by Sidike Paheding, Applied Computing, has been published in the journal, IEEE Access. “Trends in Deep Learning for Medical Hyperspectral Image Analysis,” was available for early access on March 24, 2021.

The paper discusses the implementation of deep learning for medical hyperspectral imaging.

Co-authors of the paper are Uzair Khan, Colin Elkin, and Vijay Devabhaktuni, all with the Department of Electrical and Computer Engineering, Purdue University Northwest.

Abstract

Deep learning algorithms have seen acute growth of interest in their applications throughout several fields of interest in the last decade, with medical hyperspectral imaging being a particularly promising domain. So far, to the best of our knowledge, there is no review paper that discusses the implementation of deep learning for medical hyperspectral imaging, which is what this work aims to accomplish by examining publications that currently utilize deep learning to perform effective analysis of medical hyperspectral imagery.

This paper discusses deep learning concepts that are relevant and applicable to medical hyperspectral imaging analysis, several of which have been implemented since the boom in deep learning. This will comprise of reviewing the use of deep learning for classification, segmentation, and detection in order to investigate the analysis of medical hyperspectral imaging. Lastly, we discuss the current and future challenges pertaining to this discipline and the possible efforts to overcome such trials.

DOI: 10.1109/ACCESS.2021.3068392

IEEE Access is a multidisciplinary, applications-oriented, all-electronic archival journal that continuously presents the results of original research or development across all of IEEE’s fields of interest. Supported by article processing charges, its hallmarks are a rapid peer review and publication process with open access to all readers.

Sidike Paheding Publishes Paper in Top Journal

A scholarly paper co-authored by Assistant Professor Sidike Paheding, Applied Computing, has been published in the April 2021 issue of ISPRS Journal of Photogrammetry and Remote Sensing, published by Science Direct.

The title of the paper is, “Field-scale crop yield prediction using multi-temporal WorldView-3 and PlanetScope satellite data and deep learning.”

View the article abstract here.

Paheding is a member of the Institute of Computer and Cybersystems’s (ICC) Center for Data Sciences.

Sidike Paheding Awarded MSGC Seed Grant

Michigan Space Grant Consortium

Assistant Professor Sidike Paheding, Applied Computing, has been awarded a one-year MSGC Research Seed Grant for his project, “Monitoring Martian landslides using deep learning and data fusion.”

Professor Thomas Oommen, Geological and Mining Engineering and Sciences, is Co-PI of the project. The grant will support part-time employment of two students during the award period.

This grant is supported in part by funding provided by the National Aeronautics and Space Administration (NASA), under award number 80NSSC20M0124, Michigan Space Grant Consortium (MSGC).

The MSGC Research Seed Grant Program supports junior faculty and research scientists at MSGC affiliate institutions. The program also helps mid-career and senior faculty develop new research programs. The objective of this program is to allow award recipients to develop the research expertise necessary to propose research activities in new areas to other federal or nonfederal sources.

Sidike Paheding is an assistant professor in the Applied Computing department of the Michigan Tech College of Computing.

His research interests cover a variety of topics in machine learning, deep learning, computer vision, and remote sensing. He has authored/coauthored close to 100 research articles, including several top peer-review journal papers. He is an invited member of Tau Beta Pi (Engineering Honor Society).